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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … potential, antibiotic resistance genes, and ecosystem information. … The IMG/VR database offers the largest publicly …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. … below will assist you in verifying that all required information is included. Please retain your carrier’s tracking …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research … computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their pairwise AF and ANI …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … R., … Banfield J. F., Hugenholtz P., Woyke T . Minimum information about a single amplified genome (MISAG) and a …
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Decoding Yellowstone’s Microbial Mats
… it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers … Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered surprises, adopted …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et …  14(11):1063-1071 Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … to peer review process, conveys responsibility and accountability Promote utilization of JGI products and …
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each … 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI contributions to advancing the … frontiers of environmental and energy genomics.  For more information about the science depicted, click here . …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility … of the paper. Auspice Statements Including appropriate tracking numbers is critical to facilitating the tracking of … reasons) to include all of the DOIs for proposals you accessed in the data availability section, include those DOIs …
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Metabolomics Program
Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … and the bioeconomy including understanding enzymatic transformations, pathways, and how changes in metabolism can …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … … GOLD is a web resource for comprehensive access to information regarding genome and metagenome sequencing …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … variants with sample sequencing to predict the number of successful variants made depends on project DNA Synthesis … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …
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