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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, … analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial communities, …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … program investigates the biological mechanisms that enable fungi and algae to play a vital role in carbon cycling, …
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Homepage
…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  … Our homepage video includes external footage from: University of Delaware; … of University and Research; all specimens collected and fungi isolated are preserved in the Culture Collection of …
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Secondary Metabolites Program
… the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. …
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Genome Insider
… The Genome Insider podcast brings listeners into the science that the JGI makes possible. … into their work on all kinds of organisms, from plants and fungi to microbes and viruses. Listen in to explore the data …
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Metabolomics Program
… Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of … The Metabolomics Program is focused on understanding the critical roles of metabolites in living systems, … biological and environmental samples — including microbes, fungi, plants and soils. Through a combination of …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … So it was great to hear her passion and enthusiasm for fungi. And we talk a lot about some of the technical … your talk today. It was another great example of probing fungi for natural products and finding new things. And so, …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … marine organisms. Except during the time that we worked in fungi. But what do you see as the overall theme of your … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome Institute, builds upon thousands of microbial …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … in the earlier primers. In bacteria, at least, and in most fungi, biosynthetic gene clusters, which are the genes that … the time, at least the ones we know about, are clustered in fungi. Plants are a different story and much more …
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Metabolomics
… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through … experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as … Find more details on the instrumentation we use and our …
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Partnerships: Myco-Ed
… Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students … genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate genes and more. The …
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