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Natural Prodcast Episode 14: Nigel Mouncey
… Nigel Mouncey. DAN: I’ll start by saying this is the first in-person recording that I’ve done since that first … where the pitfalls are?  NIGEL MOUNCEY: I think it’s taking a bit of risk actually.  DAN: Oh, yeah.  NIGEL … in-person part here at the integrative genomics building, Berkeley Lab, our home.  DAN: Oh, I haven’t heard anything …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to … cultivated representatives. The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which … may not be sufficient. A more recent effort in the Woyke lab is therefore focused on the application of  …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a … in new technologies, in particular through adoption of lab automation enabling ever-higher levels of throughput. We …
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Industry Engagement Program
… predominately come from the public sector: academic and government institutions — with capabilities that had … companies. Now the Department of Energy is uniting National Labs and industry, including User Facilities like the JGI, … for mining and prediction The JGI works in partnership with Berkeley Lab’s Strategic Partnerships Office and …
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Microbiome Data Science Team
… the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with …  Nat Microbiol. 3(9):1023-1031 Harrington LB et al. (2017) A thermostable Cas9 with increased lifetime in human …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) … **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE Metrics There were 2,627 unique* … target is based on 98% of the total available hours.   FY 2017 DOE Metrics 1,598 unique* JGI users in FY2017 …
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Partnerships: Adopt-A-Genome
… generation of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from … development and adoption of classroom modules Currently 206 genomes have been selected with 11 published manuscripts … datasets. It includes JGI-sequenced and publicly available datasets encompassing >150,000 isolate genomes, …
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Natural Prodcast Episode 2: The Primer, Part 2
… if you ended up here somehow without having listened to the first part, you might be a little lost, and I’d suggest you … a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You can find links to transcripts, more information on … Natural Prodcast, which continues a conversation from the first episode . You can go to part 3 here . You can find the …
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Workforce Development & Education Outreach
… the Bay Area, and established programs affiliated with the Berkeley Lab A-LIFT team.    Overall, our aim is to inspire students … internship partnership that started in the summer of 2014. … on the JGI-UC Merced internship program, a similar collaboration with AAMU was launched in 2024.  …
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Who We Are
… (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team … National Laboratory ( Berkeley Lab ), and part of the Biosciences Area. The JGI is focused on supporting the DOE …
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Natural Prodcast Episode 1: The Primer, Part 1
… secondary metabolism.  DAN: Hey there, and welcome to the first episode of Natural Prodcast. First, maybe, a little … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. Being a User Facility means that scientists from … This is the first episode of Natural Prodcast, a podcast produced by the …
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Natural Prodcast Episode 23: Aaron Puri
… And he told us about his work in inverse stable isotopic labeling, an interesting way to explore biosynthetic … briefly when you were looking at these genomes for the first time getting excited about this. And so you find these … This is just our proof of concept. And where we’re taking this now is back to the way I started to explain this …
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