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Natural Prodcast Episode 23: Aaron Puri
… to see if I’m going to slip a day on releasing it into the feeds, but I’m trying, you guys. Schedules are hard. But, … bound to it and maybe there will be some a affinity tag or a fluorescent tag, and so you can use that as a readout of activity. And I …
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Natural Prodcast Episode 4: Nancy Keller
… 3 here ), which you should be able to find earlier in the feed, the secondary metabolism field has been dominated for … of that conference, and there should be a few more in the feed, that I’m releasing along with this one, at the same … me if I had some food for them which of course, I couldn’t feed the whole school.    ALISON: Where was this?   NANCY: …
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Natural Prodcast Episode 6: Marc Chevrette
… with large collections of new microbes and new activities, feeds into some of your other research interests, Mark, … system. [ Go here to learn more about Cameron Currie’s metagenomics research, enabled in part by JGI’s Community … have something to do with it. We saw hints of a rare advantage. So if you’re not the most popular pathogen, you can …
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DOE Metrics
… new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – … experimental capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new … Operating Hours* Goal Actual Total Actual % of Goal 454 Illumina Goal (hours) Actual Total Actual % Goal FY 2011 …
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Natural Prodcast Episode 16: Marcy Balunas
… we grow it on agar plates. And on that agar plate we often feed it lots of nutrients and in the process of giving it … That is one of the really big frontiers for the next stage of natural product drug discovery I think. Or even … computational skills among biologists JGI CSP Proposal: Metagenomic mining of natural product diversity and …
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Natural Prodcast Episode 5: Brad Moore
… marine natural product biosynthesis and at the beginning stages of connecting molecules and genes. And then genomics … would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… allow that to bind. Your receptor also typically has some tag so that you can then pull down the receptor with that …
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Natural Prodcast Episode 22: Alison Narayan
… nature does this with such elegance And also to take advantage of the biological properties that these molecules have … account? Or do you and your lab focus mainly on what can we feed this and what can it actually turn over? ALISON … to test that hypothesis through site-directed mutagenesis, we would end up with dead enzymes. So often, when …
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Natural Prodcast Episode 2: The Primer, Part 2
… maybe obvious or notable. We are still in – not an early stage. I think we can identify most secondary metabolism … yeah. I mean, you might be producing things at different stages of growth or different signals from the environment … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to …
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Natural Prodcast Episode 3: The Primer, Part 3
… got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to … the  RSS link , and via most other commonly-used podcast feeds. Please subscribe, and leave a review! If you have … , or by email to  [email protected] . We’d love to get your feedback! …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… of the problem, and then how machine learning, because it feeds on so much data, right, to learn features of interest. … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …
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Plant Program
… current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing … accessions) and protocols (transformation, crossing, mutagenesis) are available to the community.   … EcoFABs link … It is now available for both eukaryotic and microbial metagenome assemblies. It is also available as an app in KBase …
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