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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to …
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Project Management Office
The JGI Project Management Office carries out a number of activities … Planning Manager Miranda Harmon-Smith DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …
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Frequently Asked Questions: Project Management
… required documentation here .  … You can request a JGI Single Sign On account at https://signon.jgi.doe.gov . This … listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … ) Metagenomes and Single Cells: IMG/M   (citation: …
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Projects
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Microbial Program
… of bacteria and archaea in their natural environments using single cell approaches. This includes linking strain-level genetic … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …
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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with …
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Products
… percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … to information regarding genome and metagenome sequencing projects, and their associated metadata, around the world. … …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … And so when I came into graduate school, I worked on that project. And it was working exactly that same kind of way, …
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DNA Synthesis Program
Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 fixation, redox reactions, and …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call … an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a broad range of … Accessing Resources at Multiple DOE User Facilities with a Single Proposal describes the resources available from the …
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IMG Group
… data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … ANI is used to ascertain the species specificity of single cells and genomes extracted from metagenomes, and also as a …
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