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Data Policy
Data produced and released by the US Department of Energy … in scientific publications. … Read more about our data management practices and the resources we provide. … Data …
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, processing and visualization of “big data,” and … approaches in data analysis and interpretation is creating new opportunities for breakthrough discoveries and …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … get to present our conversation with Marnix Medema , from Wageningen University in the Netherlands. Marnix is still … that genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … what it is, hear me make a pained analogy to the California gold rush. And we’ll talk about a new JGI paper that’s just … Because we always need new antibiotics. We need new cancer agents. We need treatments for humans. And it just so …
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … for microbiome data science, and the development of new informatics tools specifically optimized for … ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … project take shape. Yeah. JACLYN WINTER: Yeah, that was a golden age right there when we were all in the lab together and the …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research … initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … scientific merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of the …
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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … available hours. Other DOE Quarterly Metrics Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …
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Data Policy & Support
… … Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist …
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Partnerships: Adopt-A-Genome
… work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … Reach the next generation of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has:  11 CSU … some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …
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Analyze Data
Chief Informatics Officer …
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