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… & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … and biogeochemistry. This research helps translate their genomic potential into practical applications, including … and biogeochemistry. The program’s focus is on large-scale sequencing efforts that survey the vast …

The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel … no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required by …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host …   15 , 1569–1584 Roux, S. et al. (2019) Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s …

… and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … datasets to further gene function research. The  Open Green Genomes (OGG) project seeks to develop comparative … enable the exploration and identification of small and large structural variation — this variation drives major …

… bioeconomy applications. The program provides high-quality, large-scale genomic data to advance microbial research that drives … cell approaches. This includes linking strain-level genetic variation to ecological niche adaptations.  Single cell …

The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … biochemicals. The DNA Synthesis Program aims to generate large datasets to explore sequence-function relationships, … ICE and DIVA to rapidly design combinatorial construct variations. These constructs are subsequently synthesized …

… streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … regions of secondary metabolism should be. That’s still largely homology based, but then you’re using kind of a … lineages of uncultivated genomes from the GEM catalog (in green) and previously existing reference genomes (in gray). …

… experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of … ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group also performs ‘proof-of …

… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential … crop enhancement. The program aims to tap into the largely unexplored biochemical diversity within secondary … The Secondary Metabolites Program offers users extensive genomics, DNA synthesis and metabolomics capabilities to …

Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, … Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a … PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic …

… this conversation about 10 months ago. I was pretty green at the time and had some really tedious technical … it’s a result of an evolutionary process that has led into large chemical diversity because the function relates to the … genome mining software we mentioned: “ EvoMining reveals the origin and fate of natural product biosynthetic …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … as well as the development of novel methods to enable large-scale comparative analysis, mining and visualization … Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell . …