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The JGI’s Microbial Program focuses on using cutting-edge sequencing, … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates … and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These are …

… streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …

… letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call … view the proposal templates, go to the proposal submission page , login using your JGI account (create one here if you … applicants from any institution type and at any career stage. Generally, most users are able to work with Berkeley …

… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research … specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control within … resource for analysis and annotation of genome and metagenome datasets in a comprehensive comparative context. …

The Metagenome Program uses advanced sequencing technologies to … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …

… the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . …

… outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope you enjoy … allow that to bind. Your receptor also typically has some tag so that you can then pull down the receptor with that … based on what component they might be interested in like genomics, metabolomics, just basic chemistry, natural …

… info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these programs can … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … ecosystem-level impacts of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics …

… metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial … based on feasibility and scientific merit.  Arizona Genomics Institute will produce HMW DNA needed for these …

… to sort of compare, conceptually, that data with genomics and the kind of things that I do with genome … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is … exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products …