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… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The … thermostable Cas9 with increased lifetime in human plasma.  Nat Commun . 8(1):1424. Sczyrba A, et al. …

Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American …

Data produced and released by the US Department of Energy … Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and … of Composable Elements (ICE) repository and/or DNASU Plasmid Repository) at the end of the embargo period. … During …

To expand access to integrated data, improve tools and infrastructure as well as ensure … will be the development of tools and infrastructure for microbiome data science, and the development of new … subject area. … The NMDC is tackling existing gaps in microbiome science through distributed data infrastructure …

… from metagenomic samples … IMG/PR serves as a community plasmid resource, comprising the largest public collection of … Metagenome Science Program. You can also direct inquires to Simon Roux, who is the Viral Genomics Lead within the program.  … …

… … Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific … below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as … and JGI together aim to publish the first analysis of data produced at the facility, provided this is done in a …

… to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative analysis, … public datasets.  … The Integrated Microbial Genomes & Microbiomes system ( IMG/M ) supports the annotation, … Brood Pouch of a Diseased Male Seahorse. E. Bond, et. al.  2025. Microbiol Resour Announc. 2025 Draft Genome Sequence …

Dr. Roux joined the JGI in 2017 to lead viral genomics research … host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts … host dynamics in a high-altitude watershed soil ecosystem. Microbiome 11, 237 Roux et al., 2023. iPHoP: An integrated …

This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. This is … or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the … hotel chair now is Roger Linington. Roger is a professor at Simon Fraser University. And I have known Roger for quite a …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) … % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 Total 700.0     8,585     Q1 2025 175 190.304 109% … capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational …