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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …

… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … program aims to tap into the largely unexplored biochemical diversity within secondary metabolites, expanding their … of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, and signatures of …

… cells that are from candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The … still persists to date. Research Team    … Phylogenetic diversity estimates show that the gap between cultivated and … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial … Ladau, J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Microbiol Resour Announc.  … Objectives … What is IMG/M … Publications … Access to the microbial genomes and …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several … research provides insights into microbial diversity and metabolic potential, with implications for energy …

… the answer would be that there’s actually a great deal of diversity within these methanotrophs for example, that are … people doing this but we are very interested in looking at metabolic diversity and new metabolic niches to try to find … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … … Microbes constitute the largest reservoir of biodiversity and functional versatility on Earth. Their activities and interactions are …

… is that you could, therefore, expect a lot of chemical diversity. So many compounds will fulfill the same function. … about it, the only way a primary metabolite or a primary metabolic pathway is good for anything, it is if the final … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for … is on large-scale sequencing efforts that survey the vast phylogenetic and ecological diversity of fungi and algae, … The program’s fungal genomics research explores new metabolic processes and enzymes that can be applied in …