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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … for your proposal using your proposal's WIP ID (ex. 503582). Click on the correct proposal name on your search …
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New Lineages of Life Group
… of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of …
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Publications
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Single Cell Research Group
K. T., Eloe-Fadrosh E. A., Kyrpides N. C., Woyke T . Giant virus diversity and host interactions through global … Amann R., Bergin C., Ruehland C., Rubin E.M. & Dubilier, N. Symbiosis insights through metagenomic analysis of a … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Defensive symbiosis against giant viruses in amoebae
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Natural Prodcast Episode 16: Marcy Balunas
… that the squid is one– is we work on a lot of host-microbe symbiosis at this point. But the squid is probably the most … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … there are compounds in there from the bacteria that work against protistsproduce, algae and other types of settlers.  …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes claimed (or about one per student) Seven …
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Microbiome Data Science Team
S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . … Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and host interactions through global … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … associated with microeukaryotes. The program also studies giant viruses. Key research areas include terrestrial …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and … microbial lineages. Charting viral ‘dark matter’:   Viruses are abundant in the biosphere and influence …
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Plant-Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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