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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … drive innovations that could advance our understanding of Earth’s ecosystems. …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… Institute and the Molecular Foundry have launched a joint Critical Minerals and Materials proposal call . This … for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … transformative bio-based technologies that address challenges in the sourcing, recovery, and utilization of …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … Upon request, JGI staff will provide Users with a list of contributors and their corresponding ORCiD and relevant …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique … for researchers to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities for …
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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which … applications. By recovering population genomes from metagenomes, we gain insights into microbial interactions, …
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in … A primary purpose of this project is to bring educators from a broad range of …
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Publications
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Critical Assessment of Metagenome Interpretation: the second round of challenges
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and inter-organismal … These insights are crucial for addressing key environmental challenges, such as improving soil health, carbon …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … functional genomics since 2012, with a focus on addressing critical energy and environmental challenges. Through innovative research in synthetic …
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