Search

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, …

… and he has a project with the JGI to synthesize the genes for and explore the chemistry of quorum sensing … of these or any organisms. So developing good heterologous expression hosts like maybe in many fields now like in … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … while nurturing a fresh cohort of users Reach the next generation of genome scientists and recruit new talent for …

… single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … strains, whereby they can modulate host metabolism, gene expression and phenotype. We have recently identified … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy … scientists are able to link metabolic activity with gene expression, providing deeper insights into functional …

… my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for a couple … organisms to produce more riboflavin. We already had a fermentation process with already engineered strains, but … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … and efforts to refactor entire chromosomes, such as a yeast chromosome project. These advancements contribute to …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … After I got my undergraduate degree, which was in general biology, I joined the Peace Corps. And when I was … the fungi vary in number of chromosomes. Like, ironically, yeast, which has a small genome has 15 chromosomes. Where …

Yeah. DAN: Yeah. Do you think your synthesis background influences a lot of what you do? BETSY PARKINSON: Oh, it … oftentimes will bind to receptors within biosynthetic gene clusters. Specifically, these are Tet repressors that … forms of communication that you can just add in to your fermentation and try to see what happens. BETSY PARKINSON: …

… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … It was unpublished at that point. But people would push out gene clusters maybe once a month at most. Maybe twice a … if you want– if you really want to, you can do heterologous expression. You can do homologous expression techniques and …