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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

… to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied … Centers. The  Plant Gene Atlas initiative develops gene expression catalogs across JGI Plant Flagship … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … while nurturing a fresh cohort of users Reach the next generation of genome scientists and recruit new talent for …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … conditions, with only a small portion of the biosynthetic gene clusters (BGCs) being expressed. The program works to … pathway analysis, optimization of cell- and cell free-based expression platforms, tools and data for deciphering …

… and BiG-SLiCE, and now the BiG-FAM database of biosynthetic gene cluster families. And he tells us about forthcoming … was a proposal on synthetic biology of engineering gene expression in bacteria – however, the professor was actually … key aims that’s related to what I was just talking about is elucidating functions of the gene clusters in their …

… and he has a project with the JGI to synthesize the genes for and explore the chemistry of quorum sensing … of these or any organisms. So developing good heterologous expression hosts like maybe in many fields now like in … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy … scientists are able to link metabolic activity with gene expression, providing deeper insights into functional …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … energy and ecosystem management. The program aims to generate high-quality genomic datasets, particularly for … linking strain-level genetic variation to ecological niche adaptations.  Single cell sequencing approaches are also …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … the active site of an enzyme. So there is no promiscuity, generally speaking, in primary metabolism. Nevertheless, … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …