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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, … analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … those associated with microeukaryotes. The program also studies giant viruses. Key research areas include …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … about microbiology and natural products from the Great Salt Lake, and you’re going to learn, like me, what a “haboob” … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic potential of …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … scales.The Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … where he is the PI of the Laboratory for Biosynthetic Studies. Brian and I are old friends and colleagues, having … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … is a curated database of actinobacteria for evolutionary studies, and hopefully we can catch him again some time to … UGA-Langebio in Irapuato, Mexico. His interests are in microbial diversity and evolution, particularly as how …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial … seen in the past with people that have done metagenomic studies on, say, the human gut or whatever. But other than …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … products, but as a new, I call it “incarnation”, for this series of meetings. It’s because – mainly it’s due to the … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural …
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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological … sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform … as well as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified using …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … expertise to support the global research community in studies of complex biological and environmental systems. We … went on to advance basic science by sequencing scores of microbial species as well as several model organisms and …
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