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The JGI’s Microbial Program focuses on using cutting-edge sequencing, … Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in …

… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing … and exa- scales on multicore and many core architectures with the ultimate objective of facilitating omics-based …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though …

… applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an accelerated timeline as compared with the standard CSP projects. In addition, they must … samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and …

… encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial …

… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better …

JGI-UC Merced internship program, a similar collaboration with AAMU was launched in 2024.  … The CalTeach Summer … foster a profound understanding of research methodologies within the realm of education. … Through the Berkeley Lab K-12 program, the JGI collaborates with Biotech Partners to host students transitioning from …

… clones if low number of variants, or pool of variants with sample sequencing to predict the number of successful … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial aggregate, or a specific subset of free-living …

Synthesis and Metabolomics. Strong internal collaborations with  Science Programs and  Operations enable the JGI to …

Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …

… candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … Woyke T ., Doud D. F. R., Schulz F. The trajectory of microbial single-cell sequencing. Nat Methods 14(11): …

Previously, researchers had to apply to each facility with separate review schedules and selection processes, … fundamental science experiments in ways they couldn’t with projects undertaken separately at individual user … of funds. All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides …