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IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial … phenotypes that are caused by microbiomes. And what are the functions of these gene clusters? And that’s a whole … just been looking at like 16S taxonomic profiles of these communities looking at who is in there, but never like what …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … applications. By expanding our knowledge of microbial functions and interactions, the Microbial Program supports … tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in the …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … al.  2023 . Microbiology Resource Announcements. 2023 12 (10), e00548-23 Whole genome sequence of the denitrifying … Berner, et. al.  2024.  Microbiology Resource Announcements 13 (10), e00517-24 Draft genome sequence of  Nitrobacter …

… metabolism. Hey everybody, this is Dan with episode 13 of National Prodcast. This continues our little section … it’s been selected for. So if you think about the possible functions that each one metabolite could have, then you … UGA-Langebio in Irapuato, Mexico. His interests are in microbial diversity and evolution, particularly as how …

… getting them out to you all. But for now, here is episode 10 of Natural Prodcast, the primer on genome mining. Hey, … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … activity across ecosystems.  By studying microbial communities and their interactions, the Program aims to … By understanding how microbes contribute to ecosystem functions, the Program helps drive innovations that could …

… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing … (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes …

And you have these different types of particulate like 2.5, 10 PPMs and just the size of the particle and how far they … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called … there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re …

… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … diversity, leading to a better understanding of microbial communities and ecosystem function.  The Environmental … stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 Clum, A. et al. (2021)  DOE JGI …

Microbes drive critical ecosystem functions and affect global nutrient cycling, however they … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and …

… tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  MARCY: Yes. So I would … so there are– I hesitate to make a guess but maybe 50 to 100 different strains and they are in individual tubules.  …