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… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The … ISME J.   15 , 1569–1584 Roux, S. et al. (2019) Cryptic inoviruses revealed as pervasive in bacteria and archaea …

… 2024 was a year of first, including the flagship internship program between … Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in … their scientific skills and collaborating with their mentors and fellow interns. Inspired by the success of the UC …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants … in the plant growth-promoting rhizobacterium (PGPR) Pseudomonas simiae WCS417. One suggested function of these …

Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include undergraduate students. To date, more than 80 UC Merced students have contributed to the research of numerous JGI scientists. Interns say their experiences …

… 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get … lying around at home. And I would just pick them up and look at the pictures for a while. And then I was able to … we’ve done a lot on our spinosyns. We had a huge amount of learnings to apply to this second product, the UK2A base …

Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … so differently from polyketides. At least I mean, I haven’t looked at the structures and details for a long time. But… …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … a great, fun bunch of little shows lined up, and I’m really looking forward to getting them out to you all. But for now, … put out some software called DeepBGC , which is a machine learning tool that tries to look at patterns of Pfams …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … good years, Dan!  Dan: For too many years. Brad: And now look, you’re like, famous. Dan: Famous? Brad: You’re doing a …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural … things. But before that, I wanted to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- … . So this is an algorithm that identifies, using machine learning models, that very tiny precursor peptide, encoding …