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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in … The Microbial Program focuses on using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … of comparative genomic analysis Expose students to peer review process, conveys responsibility and accountability … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …
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Environmental Genomics Group
… computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better …
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Metagenome Program
… Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial Genomics. It’s one of the big data … conducted genome mining on thousands of metagenome-derived genomes. Check out http://naturalprodcast.com for show notes …
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FICUS Overview
… and enable researchers to more easily integrate the expertise and capabilities of multiple Department of Energy … researchers had to apply to each facility with separate review schedules and selection processes, making it difficult to propose projects that truly integrated the capabilities of more than one facility. The …
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Products
… all products are available for all proposal calls.   Please review the call language carefully to ensure that your … Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …
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New Lineages of Life Group
… discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … Cataloging Earth's microbial lineages through advanced genomic techniques and … reveal new lineages and functional capabilities in the microbial world. …
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Natural Prodcast Episode 11: Marnix Medema
… and a tool for predicting natural product structures from genomes. And I was writing grants furiously to try to get … when it’s, well, when the code is good enough, it can be integrated into the code base. And at the moment, we have … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …
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CSP Functional Genomics
… those not readily achievable without the capabilities and expertise available at the JGI. Proposals to this call may … the JGI at any time using a simple web-based form and are reviewed annually. For accepted proposals, sequencing, … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance , …
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Project Management Office
… Please review our FAQ in advance of contacting the PMO office.  … Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …
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Viral Genomics Group
… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses …
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