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Data Policy
Data produced and released by the US Department of Energy … Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … through all user projects accepted before FY22. … Read more about our publication policy and our efforts to see …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific … and collaborators have the right to produce manuscripts for publication and the responsibility for leading the … statement where indicated. If you use data from 4 or more proposals, include those DOIs in a data availability …
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DOE Metrics
…     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational … 8734 2005 28 33.63 8400 8760 * Reflects actual data due to analysis beyond fiscal year-end close. …
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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure as well as ensure … to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development … modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to enable users to …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … across at least two of the facilities, and generate datasets beyond what each of these facilities could generate … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …
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Mission
… provides advanced genomic capabilities, large-scale data and professional expertise to support the global … and resources. Our vision is to lead genomic innovation for a sustainable bioeconomy. ALL PROPOSALS must support the … JGI unites the expertise at Berkeley Lab,  Lawrence Livermore National Laboratory and the HudsonAlpha Institute for …
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Data Policy & Support
… … Read more about our data management practices and the resources we provide. … … and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … Additional Resources  …
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JGI Portals
Our data platforms are a key resource for the broader scientific … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes …
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Microbiome Data Science Team
… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major …
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Who We Are
… staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science and … Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our work at the JGI:  …
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Institutional User Agreements
Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for …
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FICUS-NERSC/KBASE
… discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( … community at large. In most cases where the JGI provides more customized analysis, the JGI also participates in …
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