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Celebrating 25 years of genomics research 2022 marked the … Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing …

… driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal … based on their metagenome sequence, in the context of reference isolate genomes included from the IMG/M system. … …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … favorite topic in, arguably, my area of expertise, which is genome mining. You’ll hear us talk about what it is, hear me … from the GEM catalog (in green) and previously existing reference genomes (in gray). Around the phylogenetic tree, …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to …

… the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … based on their metagenome sequence, in the context of reference isolate genomes included from the IMG/M system. … …

Genome Insider is a podcast that showcases the work of JGI …

… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …

… data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing state-of-the-art … Development and maintenance of the Integrated Microbial Genomes (IMG) data management system … As part of this …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … in the analysis and publication of the claimed genome sequences. This opportunity, provided by the …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and …

Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … For counting: text file of gene counts (mapped against reference transcriptome or de novo assembly), DGE, alignment … For counting: text file of gene counts (mapped against reference transcriptome), DGE, alignment files 134/134 Viral …