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Natural Prodcast Episode 20: Brian Bachmann
… went on to work at a groundbreaking company in the early 2000s called Ecopia, which was a very early genome mining … today, recording today. BRIAN BACHMANN: Yeah, in the year 2000. And I was trying to figure out what to do with myself … polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: It’s pretty amazing, though, …
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Frequently Asked Questions: Proposal Submission
… letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call … view the proposal templates, go to the proposal submission page , login using your JGI account (create one here if you … Release Policy. Learn more on our Data Policy & Support page.    … Sample requirements for sequencing projects can …
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Partnerships: Myco-Ed
… ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ … Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching materials and bioinformatics …
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Partnerships: Adopt-A-Genome
Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes claimed (or about one per student) Seven student-drafted articles accepted with over 20 more in draft Efforts in ongoing curriculum development … Xenorhabdus japonica DSM16522 R Robertson, et. al.  2023 . Microbiology Resource Announcements. 2023 12 (10), …
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Natural Prodcast Episode 18: A CSP Primer
… show notes, which you can always access through JGI’s webpage at  naturalprodcast.com , along with transcripts and … We don’t want to get a proposal that’s just asking for 20 microbial genomes. That is not a good fit for our annual … Management Office. You can find their emails on the CSP page, and I’ll link them in the show notes, which I’ll say …
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Frequently Asked Questions: Project Management
… access JGI tools and systems. … Go to the “ edit contacts ” page in your account. Use the form to update all information … by contacting the collaborator listed on the “info” page for that organism on the Genome Portal . … You can view … the reports by searching for projects in the portal search page and then clicking the blue “reports” button on the …
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Natural Prodcast Episode 21: Elizabeth Parkinson
But what was really interesting is when I started my lab in 2018, several papers came out right in a row all about this … Understanding of Natural Product Induction Betsy's lab webpage and the page on the From Microbes to Medicines outreach program JGI …
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Publication Policy
Proposal DOIs can be found at the top of the proposal info page on the JGI Genome Portal. You can navigate to the proposal info page using any of the below methods: Search the Genome … Click on the correct proposal name on your search results page to navigate to the proposal info page. Use a URL …
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Mission
… scientific approaches to these challenges.     Our homepage video includes external footage from:  University of … this information freely to the public databases. In 2004, the JGI established itself as a national user … program in the DOE’s Office of Science. In December 2019, the JGI relocated to the newly-built Integrative …
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Natural Prodcast Episode 14: Nigel Mouncey
… screening platform where we’d look at 10,000, 15,000, 20,000 mutants a week. We started doing a whole bunch of … a well into microtiter plate all the way up to supporting 200,000-liter fermenters.  DAN: Was that discovered there or … 30 to September 1st. The link is found all over JGI’s web pages.  DAN: And I will put it in the show notes along with …
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Natural Prodcast Episode 24: Jackie Winter and SMC
WINTER: Wow. DAN UDWARY: And I think we’ve got another 200,000 or 300,000 bacteria to go in before we go to the 1.0 … you go to the website, which is smc.jgi.doe.gov , the stats page is showing me that right now we have just over a … or whatever. If you click on the About SMC link on the main page, then you’ll see a roadmap of where I think we’re going …
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Natural Prodcast Episode 7: Ben Shen
… company Wyeth that introduced enediynes to the market in 2001 with a drug called Mylotag. Wyeth was later acquired by Pfizer in 2009. So, a simple mistake, but I’m happy to be able to … conjugates, abbreviated as “ADC”, was approved in the year 2000, and utilize the enediyne as the payload. We call it …
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