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… with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … RIViT-seq expand the known transcriptional regulatory network in bacteria, enabling the discovery of regulatory … the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given sigma factor are inferred. …

Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has … Nature Genetics, the work is part of a long-term project to sequence, annotate and analyze the genomes of more than 300 …

The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into …

For the first time in several years, the DOE Joint Genome … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and …

Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their … often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict …

Biofuels and bioproducts are a way to kick our addiction to … Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy Bioenergy Research Centers.  …

Biofuels and bioproducts are a way to kick our addiction to … Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy Bioenergy Research Centers.  …

… remembering to document his code. At JGI, he develops tools for viral discovery and analysis, with a particular fondness … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our code would …

… living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are … get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … five oceanic regions. In doing so, they found a high degree of variability in the types of microorganisms that inhabit …

Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the NeLLi Symposium, join us for a 1.5-day jamboree on November 6-7 focused on improving …

Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … International Conference for High Performance Computing, Networking, Storage and Analysis, 2018, pp. 717-730, doi: …