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Exploring novel alkane-degradation pathways in uncultured bacteria from the North Atlantic Ocean
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Size-fractionated metagenomic depth profiles from two sulfidic stations in the Chesapeake Bay.
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Diversity and Distribution of Hydrocarbon-Degrading Genes in the Cold Seeps from the Mediterranean and Caspian Seas
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FISH–FACS Enabled Targeted Recovery of Genomes from Uncultivated Environmental Microbial Populations
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence … FICUS Program Proposal Calls … Environmental Molecular Sciences Laboratory Release: Proposal Calls …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about how the JGI … The Chief Informatics Officer provides advice and strategic direction for …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what … kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what … of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program …
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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Shotgun metagenomic analysis of microbial communities from the Loxahatchee nature preserve in the Florida Everglades
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Bosea psychrotolerans sp. nov., a psychrotrophic alphaproteobacterium isolated from Lake Michigan water
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