Search

… in extreme environments to engineered microbiomes that accelerate biomass processing. This year’s portfolio … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP awardees as they embark on ambitious projects that span disciplines and scales,” said Tanja Woyke , the …

… sequencing machines at maximum) maintained by a workforce that numbered more than 100 at its peak, all the machines … JGI’s Operations Deputy Ray Turner. How extensive? Consider that the process of moving 250 people and their equipment … spaces, a decluttering method focused on keeping only items that bring joy (and are necessary for JGI’s operations). At …

… Nature Biotechnology 35, 676-683. Schulz et al. 2017. Giant viruses with an expanded complement of translation system …

… team. Based on Google Analytics data, the team noticed that a large percentage of Phytozome users who were seeking … thoughts — they’ll help us build a solid knowledge base that may inform future updates to one (or more) of the JGI … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …

… developments leveraging recent progress in AI/ML that will enable researchers to discover novel lineages of … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the … the Desert Research Institute. Metagenomic and single-cell sequence data have provided a means to access novel …

… of bacteria and interacts with cell signaling networks that control many basic cellular functions. It plays an … Ec YcgR, within the Nano-lantern scaffold. They then mined sequence databases for homologous YcgR proteins and chose a … These 92 homologues were synthesized as codon optimized sequences and cloned into the Nano-lantern scaffold. Because …

… S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . … Nature . 578:432-436 Roux S. et al. 2019. Cryptic inoviruses are pervasive in bacteria and archaea across Earth’s …

… of Northwestern University describe a two-pronged approach that starts with engineered yeast cells but then moves out … bio-design and identifying the best sets of enzymes that enable synthesis of sustainable chemical products,” … in bacterial-based systems, and so one of the things that I think is so special about this collaboration is that …

… between the class and the JGI, the students found out that their project was approved and was being funded under … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … and Proteobacteria to be the most common phyla of bacteria sequenced from the metagenomic soil samples from the four …

… have  recently published a Nature Communications paper that builds off their early collaborations that could help … and the  oilseed crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is … clearly identifies the four subgenomes based on non-genic sequences.”  In his words, the history of the strawberry is …

… have developed multiplexed assays — experimental techniques that allow simultaneous measurement of multiple samples in a … of where those binding sites are in the genome — those sequences are moving around, disappearing and appearing in … identify where transcription factors (TFs) — the proteins that flip genetic switches — bind DNA were limited to a few …

… of Northwestern University describe a two-pronged approach that starts with engineered yeast cells but then moves out … bio-design and identifying the best sets of enzymes that enable synthesis of sustainable chemical products,” … in bacterial-based systems, and so one of the things that I think is so special about this collaboration is that …