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Analysis of twelve genomes of the bacterium Kerstersia gyiorum from brown-throated sloths (Bradypus variegatus), the first from a non-human host.
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable … review by JGI staff as well as staff at the other participating facilities, who consider technical feasibility and readiness to begin work.  During scientific peer review, …
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Making a Lichen Together
… The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … one of the two main branches of fungi); another is a photosynthetic microbe, tucked in the fungus’ tissue. If … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared …
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Ancient Algae Reveal Secrets of Plant Evolution
… land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which … plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm portal. …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique opportunity … to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry in one research … review by JGI staff as well as staff at the other participating facilities, who consider technical feasibility and …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial chemical … The team also identified previously unknown promoter sequences within these gene clusters, offering new … This work conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE …
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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Laccase and Its Role in Production of Extracellular Reactive Oxygen Species during Wood Decay by the Brown Rot Basidiomycete Postia placenta▿ †
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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The JGI Data Portal: Improving User Experience
… human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience … databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics Officer. JGI’s Portals, including Phytozome , …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents … and expertise of multiple DOE National User Facilities in one research proposal.  Successful applications will … Proposals for the annual FICUS call with EMSL begin with a Letter of Intent (LOI) from a researcher, briefly …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help … analysis identified fungal gene families that help determine if these fungi act as friends or foes. The Impact … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …
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