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Draft Genomes of Two Strains of Flavobacterium Isolated from Lake Washington Sediment
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Multisubstrate specificity shaped the complex evolution of the aminotransferase family across the tree of life.
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Genome resources for three modern cotton lines guide future breeding efforts
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Testing for the Genomic Footprint of Conflict Between Life Stages in an Angiosperm and Moss Species
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH … studies, (ii) predicting which hosts these viruses are likely to infect, and (iii) identifying the genetic traits … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, … Biological systems hold extraordinary potential to power innovation in energy, … The following topics are not within scope:  Human health, pharmaceuticals, and …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and … Institute (JGI), a DOE Office of Science User Facility. The sequences were then biochemically characterized by a team … to foreign genetic elements by incorporating short sequences from infecting viruses and phages. In the event of …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not … in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes … native microbes. Metagenomes from enrichment cultures were sequenced and assembled by the JGI. From these assemblies, …
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Depth-discrete metagenomics reveals the roles of microbes in biogeochemical cycling in the tropical freshwater Lake Tanganyika
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Bosea psychrotolerans sp. nov., a psychrotrophic alphaproteobacterium isolated from Lake Michigan water
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