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… protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes … Riley et al (2016) Comparative genomics of biotechnologically important yeasts.  Proc Natl Acad Sci U S A. … al. The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi.  Science . 2011; 333: …

… led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection … doi: 10.1016/j.molcel.2020.06.022. Wright AV et al. A Functional Mini-Integrase in a Two-Protein-type V-C CRISPR System. Mol Cell. 2019 Feb 21;73(4):727-737.e3. doi: …

… the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying unknown compounds … Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, Bowen BP, …

… in carbon fixation in the dark ocean. Combining single cell genomics and synthetic biology, a team studying microbial … Woyke and her colleagues harnessed the JGI’s single cell genomics capabilities to assemble, identify, and … to experimental characterization and validation of the functional potential of these new lineages. …

The Secondary Metabolites Program offers users extensive genomics, DNA synthesis and metabolomics capabilities to … cell free-based expression platforms, tools and data for deciphering regulatory networks, and refining experimental … to explore the synthesis and function of these biologically significant compounds. By expanding the repertoire of …

DOE National Laboratories, the Community Science Program (CSP), and external collaborations. The Director ensures the … international forums. Breaking the Wall of Environmental Genomics … Jensen, R. O. et al. 2024. Phylogenomics and … Nucleic Acids Res. 48: D422-D430 Wang G et al. 2019. CRAGE enables rapid activation of biosynthetic gene …

Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single Cells group. She has also served as the Functional Genomics Department Head for the Environmental … published in Nature , applied single-cell sequencing to decode genomes of bacteria and archaea from previously …

Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute … Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy …

… and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA extractions to support … to datasets, workflows, and tools to seamlessly expand data functionality. Close partnerships with other user facilities …

… by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … viruses and phages. In these sequences are virus fragments called spacers, that indicate repelled attempts to infect … viral genome in action, they utilized a targeted technique called virusFISH. Using fluorescently tagged probes, the …