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Dan Rokhsar
Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar joined the faculty of University of California, Berkeley in 1989, as a member of the Physics Department and … Council 2009 Friday Evening Lecturer, Marine Biological Laboratory 2000 John Simon Guggenheim Fellow 2000-present …
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Fungal Friends or Foes in Plant Roots
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Their findings were described in … of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared … in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data …
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PhycoCosm Tutorial
US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, Alan Kuo, Sara Calhoun and …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… these symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), as well as …
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Massie S. Ballon
Cruz. She is one of the Biosciences Area representatives to Berkeley Lab’s Inclusion, Diversity, Equity & Accountability (IDEA) … Area Organizational Stewardship committee 2020: Lawrence Berkeley National Laboratory Director’s Award for …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), shows methanogenesis is not … to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the …
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Help from Citrus’ Bitter, Hardier Cousin
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), played a critical role in assembling, …
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I-Min (Amy) Chen
… management tools for scientific applications developed at Berkeley Lab. Dr. Chen is currently the Microbiome Computational … et al. IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata. Nucleic acids …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to … pool of talent for career opportunities at JGI and Berkeley Lab. …
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Doubling Down on Known Protein Families
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and collaborators across multiple … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now …
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JGI Hosts GPU Hackathon in May
JGI is partnering with NVIDIA and Oak Ridge National Laboratory (ORNL) to make sure our computational workload … codes are ported to the architectures we will have available.” A maximum of six teams will be hosted at the … … Oakridge National Laboratory Hackathon … From our partners …
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