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… and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … sequencing and analysis. “Using a technique called metagenome binning, we were able to reconstruct thousands of metagenome-assembled genomes (MAGs) directly from sequenced …

… plant, such as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least …

… scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, … genomes from microorganisms are shotgun (group) metagenomic sequencing and single-cell (individual) sequencing. Shotgun metagenomic sequencing takes much less time than its …

His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … et al. 2024.  Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. Nature Plants … quantitative analysis strategy for stable isotope probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022.   A …

… of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … allow researchers to focus on specific microbes within metagenome samples and associate their sequences with their … their environments. Summary The traditional shotgun metagenomics approach to learning more about environmental …