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JGI on the 2021 Highly Cited Researchers List
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … multi-institutional research team that combined field data with a reference switchgrass genome to associate climate … past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last … Users were previously limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( … are currently limited to: Public data: datasets associated with completed projects that are eligible for public …
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Webinar: SIP technologies at EMSL and JGI
… Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage … EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, NanoSIMS, … Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more the better. We want to …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to … of California (UC), Merced graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came onsite. From … huge amounts of data. I was excited to work on fungal genomics and the fact that I got to do a project involving over …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… As always, you’ll find transcripts and show notes with links to lots of other resources, especially for these … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride right … amino acid out of solution and stick another amino acid or multiple other amino acids onto it to create a small …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for the Nature … Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … Seshadri. Writing the  Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  …
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JGI@25: Strengthening Soybean
… to energy independence in the U.S. Not only does it pair with maize, the dominant source of bioethanol, in crop … been made positionally cloning genes involved in agronomic traits related to nutritional quality and disease … guys,” said Duplessis, who has collaborated with the JGI on multiple projects involving rust pathogens. “All along the …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the … function. He was one of the eight JGI researchers on the 2023 Highly Cited Researchers list, and has appeared on the …
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JGI-TMF Critical Minerals and Materials Call
… The program seeks research proposals that integrate genomics with nanoscale science, accelerating discoveries and … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … order by the reviewers. The ranked proposal list, along with a recommendation from management at the JGI and the …
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Visual Comparative Omics of Fungi for Plant Biomass Deconstruction
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the microbiome … began to offer a window into viral existence. Along with highlighting the viruses in a given sample, … over 125,000 partial and complete viral genomes. That study multiplied the number of known viral genes by a factor of …
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