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In honor of the JGI's 25th anniversary in 2022, we have revisited a … Viral Genomics Group Lead at the JGI.  To understand the microbiome systems underpinning a broad range of … ecosystems. Viruses rarely grow well in environmental samples brought back to a lab, because they often need …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … they deserve. They are so exciting. I get frustrated. Like microbiomes  – you know how that’s a big deal now. You go to … folks at UW and they collect all this DNA from various samples, patients, this and that. They’re doing all this 16S …

Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, … viruses — to support scientists around the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … the sponges or other things. And we know lots more about microbiomes and symbionts that live with other organisms, …

… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … developed at Berkeley Lab. Dr. Chen is currently the Microbiome Computational Resource Lead at the JGI, … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …

… and applying laboratory ecosystems to help transition microbiome science from largely observational to … studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for …

With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … it predicted many more likely hosts for viruses in human microbiome samples, reflecting factors such as the quality and number …

Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …

National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations … archives and makes available for research over 100,000 samples and specimens of over 60 different types of NEON …