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A functional microbiome catalogue crowdsourced from North American rivers
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on …
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Genomic features of bacterial adaptation to plants
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David Goodstein
With a background in experimental and computational surface physics, Dr. … on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to the Human … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
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The F-Box Gene Family Is Expanded in Herbaceous Annual Plants Relative to Woody Perennial Plants  
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back … MdS Hossain, J. T., Lovell, J. T.., et al. 2023. JGI plant gene atlas: an updateable transcriptome resource to improve … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?
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Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction
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Variation in Root Exudate Composition Influences Soil Microbiome Membership and Function
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