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JGI Announces 2026 Functional Genomics Recipients
… Pictured from left: [Above] Hanin Alzubaidy, Markus Covert, Sheel C. Dodani, Kathryn Fixen, … and omics capabilities to enhance understanding of gene and genome function. Understanding these functions gives researchers the tools to build engineering …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with … delicately above the leaf debris are revealed to be single bacterial cells, visible to the naked eye. The unusual size … and a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community … to learn more about the program's areas of focus, major initiatives and more.  …
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Uncovering Novel Genomes from Earth’s Microbiomes
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. Despite advances in sequencing technologies and computational methods in the … Biotechnology . Known as the GEM (Genomes from Earth’s Microbiomes) catalog, this work results from a collaboration …
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A global survey of arsenic-related genes in soil microbiomes
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base … sequence can lead to changes in protein structures and functions, but the DNA bases themselves can also be … that unlike most flowering plants and animals, fungi lack gene body methylation. The analysis revealed that 5mC in …
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DRAM for distilling microbial metabolism to automate the curation of microbiome function
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A functional microbiome catalogue crowdsourced from North American rivers
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate … of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom …
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Genomic features of bacterial adaptation to plants
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