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Genomic Characterization of Methanomicrobiales Reveals Three Classes of Methanogens
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Insights into bilaterian evolution from three spiralian genomes
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CSP Large Scale Call
… genomic science projects that address biological functions for biomanufacturing, critical minerals and materials, … and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … While applications will be accepted that address any aspect of these mission areas, priority will be given to projects …
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CheckV assesses the quality and completeness of metagenome-assembled viral genomes
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Webinar: PhycoCosm Tutorial
… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … deadlines. 25-30% of proposals are selected, pretty high in comparison to other funding agencies. The JGI doesn’t fund … populated by algal genomes thus defined. We also have some reference plant genomes to help with comparative studies of …
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Comparison between Ribosomal Assembly and Machine Learning Tools for Microbial Identification of Organisms with Different Characteristics
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a …
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … While are still working on finalizing the tree and related publication the tree is still in development and not … Q1. Are all based on PFAM classification-only and/or other reference DB (citable)? Q2. Is it possible to download these …
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Conservative taxonomy and quality assessment of giant virus genomes with GVClass
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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … they also feature in many nutrient cycles. Thus, having reference  Chaetoceros genomes would provide more … University of California, Davis proposes to develop high quality reference genomes for 10 individuals from each of …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … sequences for Actinobacteria.  Woyke  was also one of three authors on a recent study that made the cover of  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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