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Metabolomics Technology Group
… Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is …
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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Sequencing Submission Requirements for DNA Synthesis
… be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …
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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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Prokaryote Program User Advisory Committee
… The Prokaryote Advisory Committee is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the microbial and metagenome programs and report back to …
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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … data set will help identify how different elements of the ecosystem interact and respond to changes in the … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He … algal geomics and PhycoCosm portal. Dr. Grigoriev engaged thousands of researchers in genome projects and organized … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use … this time aligning it with over 50 other diverse sorghum genomes. Deep sequencing and genetic linkage analysis …
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in … for all this new cotton work, and even the original cotton project was to try to bring in molecular methods of breeding …
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