Results

A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare … system for microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for …
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Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex … a single set of chromosomes, are available. The genome assemblies highlight the multiple advances in sequencing …
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RegTransBase – a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes
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A large sequenced mutant library – valuable reverse genetic resource that covers 98% of sorghum genes
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Igor Grigoriev
DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the DOE Joint Genome … Evol . 6(7):965-978. Grigoriev et al (2021) PhycoCosm, a comparative algal genomics resource.  Nucleic Acids Res. …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha … This resource also helps in performing cross-species comparative transcriptomics. *The HudsonAlpha Genome …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … immediately explore and reuse the data from the GROWdb for comparative analyses with their own data on the KBase … Science Program and the University of Colorado Anschutz’s Genomics Shared Resource. The work (proposal …
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Comparative genomic analysis of thermophilic fungi reveals convergent evolutionary adaptations and gene losses
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A telomere-to-telomere genome assembly resource of Bipolaris sorokiniana, the fungal pathogen causing spot blotch and common root rot diseases in barley and wheat
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular Biologist at the USDA for 12 years … with their microbiomes. In addition, his group conducts comparative genomic research to understand the evolutionary …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements … cycles around them. By understanding more about the genomics of MGEs and their evolution at the cellular level, …
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