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JGI@25: Using Team Science to Build Communities Around Data
… launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of … of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… to reuse and compare data. “So we thought, let's go on a pilgrimage. Let's make a difference, from a different direction — and that's helping people do a better job curating the data,” Wilhelm … JGI users and collaborators gathered for a SIP-focused workshop at the JGI in the fall of 2024. “ We wanted to get …
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10 From JGI on the 2019 Highly Cited Researchers List
… category Prokaryote Super Program head Nikos Kyrpides , Biology & Biochemistry category Computational … to learn more about the project. Natalia Ivanova, Nikos Kyrpides, Susannah Tringe and Tanja Woyke were part of a JGI …
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JGI@25
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… the JGI DNA Synthesis Science Program, which started in 2012, and what they’ve discovered through their … between three different principal investigators (PIs) harnessed JGI’s DNA synthesis capability to better … through the JGI DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota … fungi suggested that there were multiple flagellum loss events during the diversification of terrestrial fungi, … that there were a series of rapid diversification events when fungi first invaded land. Intuitively, it makes …
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JGI-UC Merced Interns Share Their 2021 Experiences
… internship program was founded in 2014 with the goal of inspiring students to embark on a career in genomics and to … stories, told through print narratives, videos, a podcast episode, and presentations below. … … … … … … … … … … … … … … … of Genus Roseovarius … Implementing a Scalable JGI-RQC Pipeline on the Cloud …
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Nigel Mouncey
DOE National Laboratories, the Community Science Program (CSP), and external collaborations. The Director ensures the … Res. 48: D422-D430 Wang G et al. 2019. CRAGE enables rapid activation of biosynthetic gene clusters in … Application US8741603 Fermentative vitamin C production. (2012) U.S. Patent Application US8318462 Fermentation …
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Igor Grigoriev
… in genome projects and organized numerous genomics workshops. … Igor Grigoriev is the Fungal & Algal Science … et al  (2015) Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists.  … mosaicism and the fate of nucleomorphs.  Nature . 2012; 492: 59-65. Floudas D et al. The Paleozoic origin of …
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Dan Rokhsar
… leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and … Foskett Brown Chair, Computational Biology, UC Berkeley 2012 Cotton Biotechnology Award, National Cotton Council …
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Fungal & Algal Program
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… this project may also have a practical relevance with helping to synthesize codon-optimized fungal genes for various … Last summer, Wint hosted a virtual four-day data carpentry workshop for the incoming 2021 JGI-UC Merced interns to help … interns and their mentors, and Wint is slated to lead the workshop again in the 2022 program. “I’m excited — I’m …
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