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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have … engagement activities under the umbrella of the SOD Blitz Project. In hopes of controlling the spread of the disease, … represent the first-ever large-scale “citizen science” project to generate real-time data for modeling and …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for … CLOSED Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of … user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, synthetic …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that … factors bind in the genome. A key aspect of the project is understanding what TFs and regulatory networks …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … so I’m hoping we can follow up with him again as the project progresses! If you’re interested in RiPPs, I’ll put … Eric was a postdoc, and Eric and I worked on the aflatoxin project together, which – we’ve already talked a little bit …
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Natural Prodcast Episode 14: Nigel Mouncey
… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … And a little after that acquisition, I moved to another project. This time on vitamin C with a Gluconibacter .  And … spinetoram which is a semi-synthetic derivative of an intermediate in the spinosyn pathway. And so both of these are …
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Science Programs
… their expertise to enhance the scientific impact of user projects, develop cutting-edge approaches for and with users, and create … Their concerted efforts help maximize the JGI’s impact in advancing both user science and the DOE science mission. …
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Mediation of plant–mycorrhizal interaction by a lectin receptor-like kinase
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Mission
… expertise to support the global research community in studies of complex biological and environmental systems. … our service to the community through responsibly managing our people and resources. Our vision is to lead AI-driven genomic innovation to advance biotechnology.   …
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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an integrated platform for tracking JGI's sequencing projects and data warehousing. This platform streamlines project management, laboratory information tracking, and … BS in Electrical Engineering, University of New South Wales, …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was … 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, and … DOE relevant cellulosic feedstocks. He provides scientific project management for the reference eukaryotic genomes …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … measure environmental or biological samples (like cell media or lake water) without doing a metabolite extraction? … New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar and 150 nonpolar …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community … (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment and maintenance is …
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