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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … and gene expression when the fungus is present. The Impact Black cottonwood, or poplar, ( Populus trichocarpa ) is the … the Oak Ridge National Laboratory (ORNL) sponsored by the Office of Biological and Environmental Research at the …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … functions, traits and competition, illuminating the inner workings of an environment. For example, SIP experiments can … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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2025 NeLLi Symposium
…   Registration has closed   Registration fees: Regular attendees  (LBNL …   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries toward the …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale … and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. Later during his postdoctoral … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in Biology, Boston University ( magna cum …
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Assembly of Robust Bacterial Microcompartment Shells Using Building Blocks from an Organelle of Unknown Function
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a … shotgun sequencing. The team first tested the approach on bacterial laboratory models to set a reference for its … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… For the first time, a team has comprehensively described host-virus dynamics in … a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … abundance of virus can suggest a so-called “Kill the Winner” strategy: a virus infects a highly abundant host (a …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a … of the sulfur they need to grow and divide. Similar to the bacterial enzymes that fix nitrogen — nitrogenases — other … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … A step closer to a sustainable method of producing ethylene …
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Bacterial Microcompartments
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy … was developed. The exogenous nutrient bag (ENB) allowed black morels (e.g., M. importuna Kuo, O’Donnell & Volk) to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … Morel Mushrooms on MycoCosm Data Portal …
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Spatially structured bacterial interactions alter algal carbon flow to bacteria
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which …
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