Results

Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … the fungal Tree of Life, including the 1000 Fungal Genomes Project, which aims to provide a reference genome for each …
Learn more
Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … in five years, have come out of the JGI-supported project. “The JGI DNA Synthesis Science Program has been … specificity for OleA enzymes in the thiolase superfamily — featured a team working on thiolases, a superfamily of …
Learn more
The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
Learn more
IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
Learn more
The landscape of Chlamydomonas histone H3 lysine 4 methylation reveals both constant features and dynamic changes during the diurnal cycle
Learn more
The crystal structure of Grindelia robusta 7,13-copalyl diphosphate synthase reveals active site features controlling catalytic specificity
Learn more
Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … ; click on the call link to see specific details including project types supported, sample/capacity limits, and …
Learn more
Massie S. Ballon
… Massie S. Ballon is the Communications and Outreach Manager at the JGI. Through multi-platform … of and access to JGI public resources and the DOE mission, as well as help cultivate the next generation of genomic … Massie Ballon is the JGI's Communications and Outreach Manager. Click …
Learn more
Three pairs of fungal Trametes strains isolated from distinct geographic origins show conserved genomic features and adaptive response to plant biomass
Learn more
JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … these viral genomes. The new database was called IMG/VR. It featured samples from different ecosystems all over the …
Learn more
Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture … is an “excellent example” of how a 1000 Fungal Genomes project can enable studies of plant root microbiome and …
Learn more
FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… On February 8, 2024, the DOE Joint Genome Institute and the Environmental Molecular Sciences Laboratory hosted a webinar to … from the JGI and EMSL in one proposed research project. In the same proposal, researchers can also request … JGI : For general questions, contact  Christa Pennacchio , Project Management Office. For questions about the …
Learn more