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Microbial life under ice: Metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice‐covered Lakes
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DNA hypomethylation of the host tree impairs interaction with mutualistic ectomycorrhizal fungus
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DAS Tool for Genome Reconstruction from Metagenomes
… genomes, particularly from incredibly complex soil microbial communities, is crucial to understanding how these … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … from complex metagenomes than any of the single binning tools alone,” primarily because of its capacity to harness …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific … Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological function.   To jointly … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … at work around the globe Keynote Talk Title : “Wild Microbial Ecology” Microbial ecologist  Bruce Hungate , of … of generating phenazine production.” This led to them discovering that phenazine producers are enriched in the …
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Micro-Scale Applications Group
… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … The JGI uniquely offers the first quantitative Stable Isotope … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …
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Protocols
… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA …
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Three Join the JGI User Executive Committee
… The JGI User Executive Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological Society of …
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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Genomic adaptations of the green alga Dunaliella salina to life under high salinity
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Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma
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Testing for the Genomic Footprint of Conflict Between Life Stages in an Angiosperm and Moss Species
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