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… interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  … of Phytozome accessible as an interactive website. Since May 2019, v12 has not had any additional genomes added to … a successful transition from v12 to v13.  As always, please contact the team at [email protected] with any questions …

… to a pathogen. This ‘“alien’” organism — one previously unseen — is, in fact, a microscopic water mold, … ramorum (pronounced: Fy-TOFF-thor-uh ra-MOR-um) the genus in Latin translates to “plant destroyer” and it has … threaten the health of the tree. While drought conditions may slow the progress of SOD, the debilitated trees become …

… for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these initial efforts: Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early diverging fungi, and Francis … National Institute for Agricultural Research (INRAE) focused on in-depth exploration of ecology-related groups of …

… energy and environmental challenges. While a hill of beans may not seem to amount to much, the common bean (Phaseolus vulgaris) is actually a vital source of protein in many … genome of the common bean. That work was published online June 8, 2014 in the journal Nature Genetics . “Common beans …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of  Dothideomycetes fungi. The  work appeared in the June issue of  Studies in Mycology . This work was enabled … had access to over 100  Dothideomycetes genomes, just enough of a sample size to test if a computer algorithm …

… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the … Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it because she …

… that will help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of … kinds of supplies in the quest to break down plants.  In 2016, her team leveraged transcriptomics and other assays to … natural products . Those results showed that these fungi may be able to provide tools beyond biomass breakdown, …

… is the world’s leading soybean producer , and soybeans are used to produce biodiesel. The fungus  Phakopsora pachyrhizi causes Asian Soybean Rust (ASR) … as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien …

… six to the Facilities Integrating Collaborations for User Facilities (FICUS) program for fiscal year 2026, in partnership with the … Molecular Sciences Laboratory (EMSL) and other national user facilities. Focus areas for these projects include …

… Program presents… Eyes on the Prize – Launching & Sustaining Startups in Synthetic Biology Who’s Invited? All Berkeley Lab Employees and Affiliates. When: August 29th, 3:00 pm – 5:30 pm 3:00 pm – 4:15 pm: Panel … Read a synthesis from the panel discussion  here . Contact  Robin Johnston for followup questions.     …

… first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those … that the virus is not rapidly replicating, but instead may be abiding in the host genome: the strategy of lysogeny. …

… a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting … the proposal process. How do we know who is the person to contact? A:  Contacts are listed on the proposal call page. Feel free to  … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …