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… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … so starting from some of the enzymes that we had the most data on and knew the most about, working with my … I’m so excited about my lab’s robot is that it gives us a tool to help us– DAN UDWARY: You can generate that data. …

… Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are … and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in …

… sites designed to collect long-term open access ecological data to better understand how U.S. ecosystems are changing.  … Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … State University, which archives and makes available for research over 100,000 samples and specimens of over 60 …

… are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. R. R. … identified. The JGI researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst …

… the frontiers of environmental and energy genomics.  For more information about the science depicted, click here . <span data-mce-type="bookmark" style="display: inline-block; …

… and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … before you see toxin. And we have some preliminary data with other samples that we do see days to a week of a … us is connecting genes to chemistry to really expand the toolbox of biocatalysts that we work with. Seemed like …

… so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … metabolites, like sponges were a really common source for people to try to find new medicines for a long time. But … has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So …

… Sequence files for all constructs should be emailed to  Miranda … GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank …

… challenges, characterizing viruses is a key step. For decades, though, many viruses have been somewhat … v4 at the 2022 VEGA meeting below). Another JGI-developed tool, CheckV, assesses viral genomes, and grades their quality …

… Systems Engineering Group lead.   The group is responsible for developing and supporting applications that span the … and review, project and work order creation and management, automated sequence quality control and automation of microbial/metagenomic assemblies, portals that make data available to the public, and our institutional website. …