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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) … The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities …
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Genomes OnLine Database (GOLD) v.8: overview and updates
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Updated Virophage Taxonomy and Distinction from Polinton-like Viruses
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JGI Announces 2026 New Investigator Portfolio
… Nicole M. Fernandez; [Row 2]: Zachary Garvin, Chandan Kumar Gautam, Gareth Gillard, Audrey Goeckner, Jennifer Goff, … Sherbo, Jennifer E. Smith, Chin Chin Too, Brooke Weigel, Susanne Wilken, Jing Yuan, and Brittany N. Zepernick.    Each … the October 2026 review. You can also find more information about the JGI’s  various proposal calls here. …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a set of "secondary metabolites," chemical …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … Lab leadership, JGI advisory committees, and its primary funders at BER. “Under our well-established user … support of our goals,” said Mouncey. “Creating transparency about our efforts is critical for enabling complementary and …
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A More Intuitive Phytozome Interface
… interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  … with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces they have come to rely on … v13. Below are some answers to Frequently Asked Questions about the transition from Phytozome v12 to v13. Why is it …
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Rice SNP-seek database update: new SNPs, indels, and queries
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Genomes OnLine database (GOLD) v.7: updates and new features
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JGI Announces 2023 Community Science Program Awardees
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … nutrient cycling, and biogeochemistry. You can learn more about this year’s recipients on our Twitter. Samples were … Fox permafrost tunnel near Fairbanks, Alaska. (Courtesy of Mary-Cathrine Leewis) Samples were collected from across a …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and expertise. These collaborations have yielded numerous, high-quality outputs, such as data, publications and …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… from plants, microorganisms, and environmental samples using targeted and untargeted approaches. The webinar … with metabolomics analysis.  Q: Can you give us an idea about the scale of an average study? How many samples are … information for funding by JGI? A: The JGI is not a funding organization. Rather, it makes its sequencing, synthesis, …
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