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The JGI Data Portal: Improving User Experience
… in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the … processes from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal … areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of …
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Mindfully Moving JGI
… after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce … focused on keeping only items that bring joy (and are necessary for JGI’s operations). At the JGI, that translated to sorting through the stuff accumulated in offices, labs, lockers, and other storage …
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Tracing the Evolution of Shiitake Mushrooms
…   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the shii … mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … in the global  carbon cycle . As decayers, Lentinula fungi access carbon previously locked away in wood, converting it …
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FICUS
… multiple DOE National User Facilities in one research proposal.  Successful applications will focus on high-risk/high-payoff … within the focused topic areas that can be completed on an accelerated timeline as compared with the standard CSP … User Facilities, as well as DOE. Nearly all LOIs are accepted for full proposal submission, with the primary …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on … Energy Joint Genome Institute, or JGI.  Two special days occur in April: the 50th celebration of Earth Day on April … She talked about her  Community Science Project proposal with JGI, in which she’s studying a special kind of …
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CSP Large Scale Call
… (BER) program missions .  While applications will be accepted that address any aspect of these mission areas, … of JGI technical and analytical capabilities. All proposals will be externally peer-reviewed for scientific merit, … and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics and …
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CSP Functional Genomics
… the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at any time … a simple web-based form and are reviewed annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis will … All proposals will be externally peer-reviewed for scientific merit, …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… the JGI DNA Synthesis Science Program, which started in 2012, and what they’ve discovered through their … research projects in our group. It’s enabled us to accelerate gene, enzymes, and pathway discovery approaches … needed to foster interdisciplinary collaborations,” says Philipp Zerbe, the lead PI on this project. “I view the …
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JGI-TMF Critical Minerals and Materials Call
… Institute and the Molecular Foundry in one research proposal. The program seeks research proposals that integrate genomics with nanoscale science, accelerating discoveries and developing transformative … and utilization of critical minerals and materials. For accepted proposals, sequencing, synthesis, metabolomics and …
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PhycoCosm Tutorial
… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis … at Berkeley Lab. Presented by Igor Grigoriev, Alan Kuo, Sara Calhoun and Richard Hayes. …
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The Big Deal About Short Plants
… uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one …
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IMG/VR
… of IMG/VR to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …
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