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Transposon Mutagenesis Paired with Deep Sequencing of Caulobacter crescentus under Uranium Stress Reveals Genes Essential for Detoxification and Stress Tolerance
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from … for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … research community in studies of complex biological and environmental systems. We optimize our service to the community …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … has a number of applications, including pain relief. The microbes in cone snails may be involved in venom activity, …
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Benjamin Cole
… is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was … Dr. Cole’s research focus has been on understanding how microbes can colonize plant roots, focusing on genetic … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic …
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Massie S. Ballon
… and Outreach Manager at the JGI. Through multi-platform stories and outreach efforts, the team aims to broaden awareness of and access to JGI public resources and the DOE mission, … is the JGI's Communications and Outreach Manager. Click to see the coverage of JGI-enabled science highlighting user …
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Mining Metagenomes for Cas Proteins
… Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by the U.S. Department of Energy (DOE) Joint … Institute (JGI), a DOE Office of Science User Facility. The sequences were then biochemically characterized by a team … to be unearthed in sequencing and analyzing uncultivated microbes. Summary The CRISPR-Cas system is an immune …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists usually employ two different methods; … Amplification to generate enough DNA to put on a sequencer. As previously mentioned, it’s a method that’s …
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Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
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High-quality permanent draft genome sequence of the extremely osmotolerant diphenol degrading bacterium Halotalea alkalilenta AW-7T, and emended description of the genus Halotalea
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Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives
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Permanent Improved High-Quality Draft Genome Sequence of Nocardia casuarinae Strain BMG51109, an Endophyte of Actinorhizal Root Nodules of Casuarina glauca
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Draft genome sequence of Halomonas lutea strain YIM 91125T (DSM 23508T) isolated from the alkaline Lake Ebinur in Northwest China
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