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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have … of the JGI; and Scott Jackson of the University of Georgia sequenced and analyzed the genome of the common bean. That … farmers and a commercial crop for large producers. The team sequenced and assembled a 473-million basepair genome of the …
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Three Join the JGI User Executive Committee
… of the University of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go here to view the full roster of members. … the Ecological Society of America. He’s interested in how microbes influence biogeochemical cycles in soils and …
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Ancient Algae Reveal Secrets of Plant Evolution
… land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which … plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm portal. …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs … Clarissa Nobile, investigating interactions between microbes and venomous hosts. She also facilitates the …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … development of novel computational tools to identify virus sequences, the design of new experimental approaches to link … B.S. in Microbiology, Université Blaise Pascal, France M.S. in …
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two … particularly, what happens in the rhizosphere where plants, microbes and soil interact below the ground, influencing the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the … to learn more about the program's areas of focus, major initiatives and more.  … BA/MS in Biophysics, Moscow Engineering Physics Institute, Moscow, Russia PhD in Molecular …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold vast potential for …   The Science Hydrothermal vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. … and DBI-2047598 to K.A. We thank the Department of Energy Joint Genome Institute (Community Science Program award 339, …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … and Proteobacteria to be the most common phyla of bacteria sequenced from the metagenomic soil samples from the four …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a … using advanced technologies to reconstruct the complete sequences of individual chromosomes. The team describes the … hypothesizes the difference might not be due to repeated sequences, but rather the more accurate assembly of regions …
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Ian Blaby
… Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three groups focused on … with a view to developing a deeper understanding of sequence-based gene function. … tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and eukaryotes. …
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