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… zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … the roles played by neighboring cells in these processes.   One of the study’s co-authors is  Benjamin Cole , a research …

… assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference … using advanced technologies to reconstruct the complete sequences of individual chromosomes. The team describes the … hypothesizes the difference might not be due to repeated sequences, but rather the more accurate assembly of regions …

… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In order to do …

… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers … in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes … native microbes. Metagenomes from enrichment cultures were sequenced and assembled by the JGI. From these assemblies, …

… projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user facilities—the  Environmental Molecular Sciences Laboratory (EMSL) and the  DOE … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …

… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint … , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our research team …

… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …

… Congratulations to the 2023 Highly Cited Researchers from the JGI … in their chosen field or fields through the publication of multiple highly cited papers during the last decade” … elements based upon their gene content and their genetic sequences. Roux was first author on a study featuring a new …

… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …

… In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia … framework provided by these high quality reference genome sequences could help researchers better understand related … award at  https://doi.org/10.46936/10.25585/60001405 ) conducted by the US Department of Energy Joint Genome …

… and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found … called geNomad identifies and classifies MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the …

… habitat. The Science By comparing genetic information from similar organisms, researchers have gained insights on why the dry rot ( Serpula lacrymans ) is so destructive … Serpula species, S. himantioides from Europe, that was sequenced and analyzed by the JGI. The researchers found …