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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the … next 3 episodes are the story behind that giant assembly from Lake Mendota. In this episode: the software evolution …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and … data with existing bioinformatic methods to bridge the gap from sequence to biology. …
Learn more
Adopt-A-Genome
… papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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MGM Workshop at Fisabio Summer School 2026
… Register here for the workshop The MGM Workshop is Module 4 of the Fisabio Summer School.  The workshop is addressed to students and professionals of biology, biomedical research, the health … system, presented by Rekha Seshadri and Mateus Fiamenghi from the Microbiome Data Science group. …
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Katherine Louie
… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in support … probing (SIP) to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex …
Learn more
Mike Sneddon
… Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … science.  Dr. Sneddon is an accomplished leader in data, software, compute, and AI for large-scale genomics and lab … earned his PhD in Computational Biology and Bioinformatics from Yale University. …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… [Pictured from left to right are: [Above] Sara Branco, Asdrubal … Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at … — Summit and Frontier — that process terabytes of data with MetaHipMer2. And the National Energy Research …
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at …
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Crops as Tough as World Cup Turf
… Torrres have looked into traits that could transfer from grasses into other crops.  One grass they studied just …
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Dan Rokhsar
… directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team … and Development after his research interests shifted from condensed matter physics to computational biology, …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… Three stories of JGI-supported research, connected to nutrient cycles. … Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao Ma. And Karen Serrano and Benjamin …
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