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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral … symposium was to bring together a “Viral EcoGenomics” community to foster discussion on how to best capture and …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast …
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Marianne Buscaglia
Marianne is an affiliate researcher who uses metagenomics to … in analyzing genes that can impact the metabolism of their hosts. …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and … at Lawrence Berkeley National Laboratory through the Community Science Program . The comparative framework …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted several UC … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … and mentors Igor Grigoriev and Bishoy Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna …
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W. Berkeley Kauffman
Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, single-particle genomics, and metabolic …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their … carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system …
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Webinar: Introducing the BioSANS capability
The BioSANS instrument is at the Center for Structural Molecular … on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … The U.S. … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership … CE, Auber RP, et al. (2023) Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy … Google Scholar … Education … Awards and Service … Selected Publications …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
P. psychrophila genes drive resilience when salinity fluctuates. The … ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … Berkeley National Laboratory (Berkeley Lab). In their analysis, they found the salinity changes led the algae to …
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Trent Northen
… to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … Schadt, C., Martin, S., Carrell, A. et al. An integrated metagenomic, metabolomic and transcriptomic survey of … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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